Structure of PDB 7loo Chain B

Receptor sequence
>7looB (length=378) Species: 1268998 (Escherichia coli 908573) [Search protein sequence]
HLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLV
GGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDI
NQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVR
KNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAV
MEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYG
GMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAI
GVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYK
ETAAYGHFGREHFPWEKTDKAQLLRDAA
3D structure
PDB7loo Substrate Dynamics Contribute to Enzymatic Specificity in Human and Bacterial Methionine Adenosyltransferases.
ChainB
Resolution1.95 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 POP B H14 K165 K245 H12 K163 K243
BS02 SAM B H14 D163 K165 S186 T227 F230 D238 H12 D161 K163 S184 T225 F228 D236
BS03 POP B D118 K265 D116 K263
BS04 SAM B E55 Q98 D101 I102 K269 I302 E53 Q96 D99 I100 K267 I300
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 16:47:41 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7loo', asym_id = 'B', title = 'Substrate Dynamics Contribute to Enzymatic Speci...an and Bacterial Methionine Adenosyltransferases.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7loo', asym_id='B', title='Substrate Dynamics Contribute to Enzymatic Speci...an and Bacterial Methionine Adenosyltransferases.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0004478,0005524,0006556', uniprot = '', pdbid = '7loo', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004478,0005524,0006556', uniprot='', pdbid='7loo', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>