Structure of PDB 7ki5 Chain B

Receptor sequence
>7ki5B (length=158) Species: 10941 (Human rotavirus A) [Search protein sequence]
LDGPYQPTNFKPPNDYWILLNPTNQQVVLEGTNKTDIWVALLLVEPNVTN
QSRQYTLFGETKQITVENNTNKWKFFEMFRSNVSAEFQHKRTLTSDTKLA
GFMKFYNSVWTFHGETPHATTDYSSTSNLSEVETVIHVEFYIIPRSQESK
CSEYINTG
3D structure
PDB7ki5 Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.
ChainB
Resolution1.52 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B Y107 S109 W111 Y124 Y106 S108 W110 Y123
BS02 GAL B F106 Y107 F105 Y106
BS03 GAL B T121 T122 T120 T121
Gene Ontology
Biological Process
GO:0019058 viral life cycle
Cellular Component
GO:0019028 viral capsid

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7ki5, PDBe:7ki5, PDBj:7ki5
PDBsum7ki5
PubMed34475219
UniProtQ91E88

[Back to BioLiP]