Structure of PDB 7kei Chain B

Receptor sequence
>7keiB (length=180) Species: 9606 (Homo sapiens) [Search protein sequence]
GSPEDFVFQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVT
PQGRPDAEYWNSQKEVLEGTRAELDTVCRHNYEVAFRGILQRRVEPTVTI
SPSNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILV
MLEMTPQRGDVYTCHVEHPSLQSPITVEWR
3D structure
PDB7kei Crystal structure of DQA1*01:02/DQB1*06:02 in complex with a flu peptide.
ChainB
Resolution1.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide B F11 Y30 D57 Y60 W61 E74 V78 H81 N82 F10 Y29 D56 Y59 W60 E73 V77 H80 N81
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7kei, PDBe:7kei, PDBj:7kei
PDBsum7kei
PubMed
UniProtQ5SU54

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