Structure of PDB 7fd2 Chain B

Receptor sequence
>7fd2B (length=419) Species: 59300 (Getah virus) [Search protein sequence]
SVTEHFNVYKATKPYLAYCADCGDGQFCYSPVAIEKIRDEASDGMIKIQV
AAQIGINKGGTHEHNKIRYIAGHDMKEANRDSLQVYTSGVCAIRGTMGHF
IVAYCPPGDELKVQFQDAESHTQACKVQYKHAPAPVGREKFTVRPHFGIE
VPCTTYQLTTAPTEEEIDMHTPPDIPDITLLSQQSGNVKITAGGKTIRYN
CTCGSGNVGTTSSDKTINSCKIAQCHAAVTNHDKWQYTSSFVPRADQLSR
KGKVHVPFPLTNSTCRVPVARAPGVTYGKRELTVKLHPDHPTLLTYRSLG
ADPRPYEEWIDRYVERTIPVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGW
PHEIILYYYGLYPAATIAAVSAAGLAVVLSLLASCYMFATARRKCLTPYA
LTPGAVVPVTLGVLCCAPR
3D structure
PDB7fd2 Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
ChainB
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.90: togavirin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLR B P351 I355 Y358 Y362 A365 T366 P351 I355 Y358 Y362 A365 T366
BS02 CLR B I355 L356 I355 L356
BS03 CLR B Y359 I367 V370 Y359 I367 V370
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:7fd2, PDBe:7fd2, PDBj:7fd2
PDBsum7fd2
PubMed35149682
UniProtQ5Y388|POLS_GETV Structural polyprotein

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