Structure of PDB 7e7h Chain B

Receptor sequence
>7e7hB (length=428) Species: 303 (Pseudomonas putida) [Search protein sequence]
YDVIVIGGGFAGVTAAREASRSGLKTLILEGRSRLGGRTFTSKLQNQKVE
LGGTWVHWTQPNVWTEIMHYGLEVEETVPETVIWVTEDNVKRAPAAEAFE
IFGSACNEYYKEARNIYPRPFEPFFERKKLQHVDGLSAADYLEKLPLTRE
QKDMMDSWLSGNGHNYPETIAYSEIMRWFALSNFNMPTMFDSIARYKIKT
GTHSLLEAIMADGNSEVKLSTPVTKVNQDKDKVTVTTEDGVFTASAVIVA
VPINTLHDIEYSPKLSAAKVDMGSQRHAGAGVKGYIRVAQNVGNVMTYAP
ARNKLTPFTSVFTDHVDEAGTLLIAFSADPKLIDINDIKAVEKALQPLLP
GVEVTASYGYDWNLDPFSKGTWCTYRPNQTTRYLTELQKREGRLFFAGSD
MANGWRGFIDGAIENGREVGHQVATYLK
3D structure
PDB7e7h Crystal Structure of a pseudooxynicotine amine oxidase Pnao from Pseudomonas putida S16
ChainB
Resolution2.2 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FAD B G65 G67 A69 E88 G89 R90 G95 R96 G110 G111 T112 W113 V285 V313 P314 I321 W424 F429 T433 W434 G460 S461 G469 F470 I471 A474 G7 G9 A11 E30 G31 R32 G37 R38 G52 G53 T54 W55 V223 V251 P252 I259 W362 F367 T371 W372 G398 S399 G407 F408 I409 A412
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sat Nov 30 03:22:15 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7e7h', asym_id = 'B', title = 'Crystal Structure of a pseudooxynicotine amine oxidase Pnao from Pseudomonas putida S16'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7e7h', asym_id='B', title='Crystal Structure of a pseudooxynicotine amine oxidase Pnao from Pseudomonas putida S16')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016491', uniprot = '', pdbid = '7e7h', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016491', uniprot='', pdbid='7e7h', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>