Structure of PDB 7dt1 Chain B

Receptor sequence
>7dt1B (length=845) Species: 1613 (Limosilactobacillus fermentum) [Search protein sequence]
AGPWENMAYSMDSNSINNIDGYISYTGWYRPYGTSQDGKTWYPTTVADWR
PILMYVWPSKDVQVKFIQYFVNHGYENSNYGLTAGSVKDLSENTASIKLN
EVAQNLRYVIEQHVVAAKSTSQLANDINNFITTIPELSKASELSVVNSYG
YKPDNSGSVDDDQVIFVNNDSKNQKIGNTSYADSNYRLMNRTINNQNGDN
NSDDSPELLVGNDIDNSNPVVQAENLNWEYFLLNYGKFMNYNPNGNFDGF
RIDAADNIDADVLDQAAQLINSIYNTKGNQANANDHLIYNEGYHLGAANM
LDRKSNPELYMDSGYFYTLENVLGRASDRDDINNLITNSIVNRQNDVSEN
VATPNWSFVTNHDQRKNLINQIVIDDHPGVADIMSDGYKAEYVNQAWKEF
YADQARTDKKYTQYNLPAQYALLLTNKDTVPQVYYGDLYDETDQYMQNKS
VYYDAITTLMKARKSYVSGGQSMIKINDHLLTSVRYGKGIIDGNVSMTDI
LGRNSGIAVVVGNDAQMANQTISINMGKAHANQAYKQLLGTIDSGLTSSD
TTIYHTDSNGVLNVTVKGYSNPYVSGYLGVWVPLNGGANITTKASEVTNQ
SDKTYSSNAALDSHVIYEDFSLFQPEPTSKAEHAYNIIADNASLFNELGI
TDFWMAPAYTPFNTSRYNEGYSMTDRYNLGTEANLTKYGSGEELSNAIAA
LHDAGLKVQEDLVMNQMIGFSGQEAVTVTRTDGHAKQLTVDGKTFANQIY
FAYTRGGGEGQKNYGGKYLDELQKKYPELFTTKAVSTGVAPDPSVHITEW
SAKYQNGTSLQNIGIGLAVKLANGDYAYLNDSNNKAFNTTLPETM
3D structure
PDB7dt1 Characterization of a new 4,6-alpha-glucanotransferase from Limosilactobacillus fermentum NCC 3057 with ability of synthesizing low molecular mass isomalto-/maltopolysaccharide
ChainB
Resolution2.43002 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.5: dextransucrase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA B E397 D403 N447 N905 E207 D213 N257 N715
BS02 CA B D443 E481 D253 E291
BS03 CA B D630 N638 K639 D440 N448 K449
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0046527 glucosyltransferase activity
GO:0046872 metal ion binding
GO:0047849 dextransucrase activity
Biological Process
GO:0009250 glucan biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7dt1, PDBe:7dt1, PDBj:7dt1
PDBsum7dt1
PubMed
UniProtA0A1Z2RUD1

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