Structure of PDB 7de2 Chain B

Receptor sequence
>7de2B (length=270) Species: 1392255 (Aspergillus novofumigatus IBT 16806) [Search protein sequence]
SRTWCESEMLFVQPEELYYRVTPKPGQTQANFNWTPHKVRFHDARPQRDS
FDLNTHGFTFVEDAISPQLIERIRADDTAAVEGDYFASVAALVKRVTGAD
HVVCFSPYTRKENSEKGIFGQPARTVHCDHTPAAAIELTHKLCGEDAVRL
LQSRFRAFSVWRPLVEPVLDWPLAVVDGRTIAPDDLHPVHWLRYEKKDTE
PPFQLSFSETQKWYYLSRQRSDEVSIVKNYDSEVVPSPRSAHCAFKHPFV
PKDAPPRESIDVRCLVFGGR
3D structure
PDB7de2 Molecular insights into the endoperoxide formation by Fe(II)/ alpha-KG-dependent oxygenase NvfI.
ChainB
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.14.11.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AKG B R118 P130 A131 H135 D137 S167 W169 L181 H250 R265 D269 R271 R110 P122 A123 H127 D129 S159 W161 L173 H242 R257 D261 R263
BS02 FE B H135 D137 H250 H127 D129 H242
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
Biological Process
GO:0016114 terpenoid biosynthetic process
GO:0140782 novofumigatonin biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7de2, PDBe:7de2, PDBj:7de2
PDBsum7de2
PubMed34285212
UniProtA0A2I1BSX0|NVFI_ASPN1 Fe(II)/2-oxoglutarate-dependent dioxygenase nvfI (Gene Name=nvfI)

[Back to BioLiP]