Structure of PDB 7d6v Chain B

Receptor sequence
>7d6vB (length=239) Species: 1772 (Mycolicibacterium smegmatis) [Search protein sequence]
ATYDAKLRVWRGDDTGGELHDYTVEVNDGEVVLDIIHRLQATQTPDLAVR
WNCKAGKCGSCSAEINGRPRLMCMTRMSTFGEDEVVTVTPLRTFPVMRDL
VTDVSFNYEKARQIPSFTPPKDLQPGEYRMQQEDVNRSQEFRKCIECFLC
QNVCHVVRDHEENKENFAGPRFHMRIAELDMHPLDTVDRKEMAQDEFGLG
YCNITKCCTEVCPEHIKITDNALIPMKERVADRKYDPIV
3D structure
PDB7d6v Architecture of the mycobacterial succinate dehydrogenase with a membrane-embedded Rieske FeS cluster.
ChainB
Resolution2.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FES B C54 K55 G57 C59 G60 C62 C74 C53 K54 G56 C58 G59 C61 C73
BS02 SF4 B C145 I146 C148 F149 C151 C213 P214 C144 I145 C147 F148 C150 C212 P213
BS03 F3S B C155 P171 C203 N204 I205 K207 C208 C209 T220 L224 C154 P170 C202 N203 I204 K206 C207 C208 T219 L223
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0016491 oxidoreductase activity
GO:0051536 iron-sulfur cluster binding
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0006099 tricarboxylic acid cycle
GO:0009060 aerobic respiration
GO:0022904 respiratory electron transport chain
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7d6v, PDBe:7d6v, PDBj:7d6v
PDBsum7d6v
PubMed33876763
UniProtA0QPJ2

[Back to BioLiP]