Structure of PDB 7d6b Chain B

Receptor sequence
>7d6bB (length=477) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence]
AMAIHRSDFPASFLFGTATSSYQIEGAYLEGNKSLSNWDVFTHLPGNIKD
GSNGDIADDHYHRYEEDVELMNSLGVNAYRFSISWSRILPKGRFGGVNPA
GIDFYNKLIDSILLKGIQPFVTLTHYDIPQELEDRYGAWLNAEIQSDFGH
FADVCFGAFGDRVKYWTTFNEPNVAVRHGYMLGTYPPSRCSPPFGHCARG
GDSHAEPYVAAHNVILSHATAIEIYKRKYQSKQRGMIGMVLYSTWYEPLR
DVPEDRLATERALAFETPWFLDPLVYGDYPPEMRQILGGRLPSFSPEDRR
KLRYKLDFIGVNHYTTLYARDCMFSDCPQGQETQHALAAVTGESNGLPIG
TPTAMPTFYVVPDGIEKMVKYFMRRYNNLPMFITENGYAQGGDSYTDAED
WIDDEDRIEYLEGYLTKLAKVIRDGADVRGYFAWSVVDNFEWLFGYTLRF
GLYYIDYRTQERSPKLSALWYKEFLQN
3D structure
PDB7d6b Structural analysis of rice Os4BGlu18 monolignol beta-glucosidase.
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.21: beta-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LGC B Q46 H148 N193 E194 Y337 E408 W457 E464 F473 Q23 H125 N170 E171 Y314 E385 W434 E441 F450
BS02 ZN B D82 H85 D59 H62
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7d6b, PDBe:7d6b, PDBj:7d6b
PDBsum7d6b
PubMed33471829
UniProtQ7XSK0|BGL18_ORYSJ Beta-glucosidase 18 (Gene Name=BGLU18)

[Back to BioLiP]