Structure of PDB 7bm6 Chain B

Receptor sequence
>7bm6B (length=727) Species: 63186 (Zobellia galactanivorans) [Search protein sequence]
AQEHPSLILTKAGVEKIRAELGNIPIFDATLEKVKAEVDAEIALGIDTPL
PKDYSGGYTHERHKRNFFILQKAGVLYQILNDEKYALYIKDMLFQYEGMY
KDLPVHPQTRSYARGKLFWQCLNDSNWLVYVSQAYDCVYDYLSKKERKQL
EKNLFRPFADYISIENPQFYNRVHNHSTWGNAAVGMIGLVMGDEELIQRA
LYGIEDDGLPIGAKDNDGGFIKVEGQKAGFLANIDEPFSPDGYYTEGPYA
QRYAMYPFLIFAEALHNVRPQQKIFEHKDGVLLKSVNTLLSLSDADGEFF
PLNDAQKGMSYHSRELVTAVDIAYHYGNHNPQLLSIAEEQGQVLLDDSGL
AVALGIREGKSEDFQKKSIKLSDGANGDQGGVAILRYGNEAMTLVYKYAA
QGLSHGHYDKLSFSLYEKGTEILQDYGLARFVNIEQKGGGNYLKENTTWA
KQTIAHNTLVQNETSHFEGKYEVGSQHHSELYFFDASNPEVQVVSAKEQN
AYPGTEMHRTMALIKTDGFEKPFVLDILRVGSNAANQYDLPFYFKGQVMQ
TNFDFTTPKSLEPLGSDNGYQHLWSEGLGQPKGDNSQLSWLENGRFYTLT
TATNNDDELHFVRIGANDPEFNLRRDAGLIIRRKNTKNTTFVSILESHGH
YSPVSEFSVNANSSISKIELMLDTKEYTAVLIDAKSNTEQTLLILANENK
NVNKEHIIEIKGKEYRWTGPYQFIKIN
3D structure
PDB7bm6 Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans DsijT.
ChainB
Resolution2.16 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.2.2.3: mannuronate-specific alginate lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAV B Q144 N199 H200 D241 H429 R454 Y466 Q120 N175 H176 D217 H405 R430 Y442
BS02 MAW B N147 Y273 R276 Y277 R454 N123 Y249 R252 Y253 R430
BS03 MG B H198 N257 Y268 H174 N233 Y244
BS04 CA B H431 D449 H480 H407 D425 H456
Gene Ontology
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:7bm6, PDBe:7bm6, PDBj:7bm6
PDBsum7bm6
PubMed34184062
UniProtG0LCA3

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