Structure of PDB 7bgi Chain B
Receptor sequence
>7bgiB (length=733) Species:
3055
(Chlamydomonas reinhardtii) [
Search protein sequence
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ATKLFPKFSQGLAQDPTTRRIWYGLAMAHDFESHDGMTEENLYQKIFASH
FGQLSIIFLWTSGNLFHVAWQGNFEQWVTDPVHIRPIAHAIWDPHFGQPA
VEAFTRGGASGPVNISTSGVYQWWYTIGMRTNQDLYVGSVFLALVSAIFL
FAGWLHLQPNFQPSLSWFKDAESRLNHHLSGLFGVSSLAWTGHLVHVAIP
ESRGQHVGWDNFLSVLPHPQGLTPFFTGNWAAYAQSPDTASHVFGTAQGS
GQAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHR
MQAILEAHTPPSGSLGAGHKGLFDTVNNSLHFQLGLALASVGTITSLVAQ
HMYSLPPYAFQAIDFTTQAALYTHHQYIAGFIMCGAFAHGAIFFIRDYDP
EQNKGNVLARMLDHKEALISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPE
KQILIEPVFAQWIQAAHGKALYGFDFLLSSKTSAAFANGQSLWLPGWLDA
INNNQNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDK
KDFGYSFPCDGPGRGGTCDISAYDAFYLAVFWMLNTIGWVTFYWHWKHLT
LWQGNVAQFDESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWTF
LFGHLIYATGFMFLISWRGYWQELIETLVWAHEKTPLANLVYWKDKPVAL
SIVQARLVGLAHFSVGYIFTYAAFLIASTSGRF
3D structure
PDB
7bgi
Dimeric and high-resolution structures of Chlamydomonas Photosystem I from a temperature-sensitive Photosystem II mutant
Chain
B
Resolution
2.54 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CL0
B
L621 W626
L620 W625
BS02
CLA
B
V439 W583 N586 W590 L617
V438 W582 N585 W589 L616
BS03
CLA
B
V443 F447
V442 F446
BS04
CLA
B
S421 S424 W425 L428
S420 S423 W424 L427
BS05
SF4
B
C560 G562 P563 C569 W668
C559 G561 P562 C568 W667
BS06
CLA
B
S424 S427 L428 G431 F432 L533 I534 L579 F582 W583
S423 S426 L427 G430 F431 L532 I533 L578 F581 W582
BS07
CLA
B
W649 L652 F653 H655 L656 A659
W648 L651 F652 H654 L655 A658
BS08
CLA
B
L679 H683
L678 H682
BS09
CLA
B
Y438 A523 W590 F593 L617 W620 L625 S629 F651 H655 Y658 Y718 T721 Y722 F725
Y437 A522 W589 F592 L616 W619 L624 S628 F650 H654 Y657 Y717 T720 Y721 F724
BS10
CLA
B
A659 T660 F662 M663 Y671 W672
A658 T659 F661 M662 Y670 W671
BS11
CLA
B
F6 F9 A29 H30 I57
F5 F8 A28 H29 I56
BS12
CLA
B
H30 Y44 I47 S50 H51 Q54 R175 L331 L335 A338
H29 Y43 I46 S49 H50 Q53 R174 L330 L334 A337
BS13
CLA
B
H30 Q54 I58 W61
H29 Q53 I57 W60
BS14
CLA
B
L60 W61 F67 H68 W71 Q72
L59 W60 F66 H67 W70 Q71
BS15
CLA
B
N65 A89 H90 N115 S117 S119 V646 W647
N64 A88 H89 N114 S116 S118 V645 W646
BS16
CLA
B
I92 W93 D94 H96 F97 N115 V646 W649
I91 W92 D93 H95 F96 N114 V645 W648
BS17
CLA
B
F48 F52 I149 A153 L156 H157 F162 W168
F47 F51 I148 A152 L155 H156 F161 W167
BS18
CLA
B
W168 H178 T294
W167 H177 T293
BS19
CLA
B
F48 H51 F52 W124 W168 R175 H178 H179 L183 F184
F47 H50 F51 W123 W167 R174 H177 H178 L182 F183
BS20
CLA
B
M130 F142 A190 W191 H194 H197 V198 G209 W210 F213
M129 F141 A189 W190 H193 H196 V197 G208 W209 F212
BS21
CLA
B
L189 A190 T192 H197 L217 P218 G222 L223 L279
L188 A189 T191 H196 L216 P217 G221 L222 L278
BS22
CLA
B
W231 A232 L256 H276 L279 A280 V283 V287 L493
W230 A231 L255 H275 L278 A279 V282 V286 L492
BS23
CLA
B
F258 L269 D273 H276 H277 H352 W498
F257 L268 D272 H275 H276 H351 W497
BS24
CLA
B
S187 W191 H277 H278 I281 I345 V349 P358 Y359
S186 W190 H276 H277 I280 I344 V348 P357 Y358
BS25
CLA
B
L180 F285 A288 M291 Y292 I305
L179 F284 A287 M290 Y291 I304
BS26
CLA
B
H178 S181 V186 H290 T294 F296
H177 S180 V185 H289 T293 F295
BS27
CLA
B
V287 H290 M291 I298 G299 H300
V286 H289 M290 I297 G298 H299
BS28
CLA
B
H300 I305 A308 H309
H299 I304 A307 H308
BS29
CLA
B
L306 H309 H320 V408 M412
L305 H308 H319 V407 M411
BS30
CLA
B
A172 R175 L176 H179 F184 M302 F324 L337 A338 S341
A171 R174 L175 H178 F183 M301 F323 L336 A337 S340
BS31
CLA
B
S347 L348 Q351 Q377 M384 F388 L528 T531 T532 M584
S346 L347 Q350 Q376 M383 F387 L527 T530 T531 M583
BS32
CLA
B
L348 Q351 H352 S355 F510
L347 Q350 H351 S354 F509
BS33
CLA
B
W61 T118 S119 A371 T374 H375 Y378 I379 I719 A723
W60 T117 S118 A370 T373 H374 Y377 I378 I718 A722
BS34
CLA
B
W61 T62 G120 W124 T346 V349 M353 Y359 H375 H376
W60 T61 G119 W123 T345 V348 M352 Y358 H374 H375
BS35
CLA
B
A27 H30 D31 L335 L339 F382 G386 H390 Y556 Y574 F577 V716 F720
A26 H29 D30 L334 L338 F381 G385 H389 Y555 Y573 F576 V715 F719
BS36
CLA
B
L316 V408 R411 M412 H415 L419 H422
L315 V407 R410 M411 H414 L418 H421
BS37
CLA
B
H422 W425
H421 W424
BS38
CLA
B
W425 F429 H433
W424 F428 H432
BS39
CLA
B
G436 V439 H440 M444 K452 I454
G435 V438 H439 M443 K451 I453
BS40
CLA
B
W463 I464 H468 L479 W498
W462 I463 H467 L478 W497
BS41
CLA
B
L478 A485 A486 N489 W494
L477 A484 A485 N488 W493
BS42
CLA
B
Y354 A461 I464 Q465 F510 L511 H521 I524 V591 Y594 W595 K598
Y353 A460 I463 Q464 F509 L510 H520 I523 V590 Y593 W594 K597
BS43
CLA
B
F429 L430 P458 V459 F460 A461 F518 H521 H522
F428 L429 P457 V458 F459 A460 F517 H520 H521
BS44
CLA
B
L423 V426 H529
L422 V425 H528
BS45
CLA
B
T19 W23 H683 Y693 W694 K695 P698
T18 W22 H682 Y692 W693 K694 P697
BS46
CLA
B
F653 L656 F664 H713
F652 L655 F663 H712
BS47
CLA
B
H309 T310 P311 P312 S315
H308 T309 P310 P311 S314
BS48
CLA
B
K8 K46 A49 L151 L158
K7 K45 A48 L150 L157
BS49
PQN
B
M663 F664 S667 W668 R669 W672 A700 L701 A706
M662 F663 S666 W667 R668 W671 A699 L700 A705
BS50
CA
B
E202 H207
E201 H206
BS51
T7X
B
H433 T434 H522
H432 T433 H521
BS52
CLA
B
F460 W463
F459 W462
BS53
CHL
B
W210 D211 L214
W209 D210 L213
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009507
chloroplast
GO:0009522
photosystem I
GO:0009535
chloroplast thylakoid membrane
GO:0009579
thylakoid
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7bgi
,
PDBe:7bgi
,
PDBj:7bgi
PDBsum
7bgi
PubMed
UniProt
P09144
|PSAB_CHLRE Photosystem I P700 chlorophyll a apoprotein A2 (Gene Name=psaB)
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