Structure of PDB 7amn Chain B

Receptor sequence
>7amnB (length=186) Species: 663 (Vibrio alginolyticus) [Search protein sequence]
RTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFP
TREDLVDEVLNHVVRQFSNFLSDNIDLDLHARENIANITNAMIELVSQDC
HWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCHDSE
HLANLFHGICYSLFVQANRAAELKHLVNSYLDMLCI
3D structure
PDB7amn Binding site profiles and N-terminal minor groove interactions of the master quorum-sensing regulator LuxR enable flexible control of gene activation and repression.
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B R9 R11 L12 P14 R17 R36 S49 A51 T52 N55 Y56 R1 R3 L4 P6 R9 R28 S41 A43 T44 N47 Y48
BS02 dna B R9 F54 P58 T59 R60 R1 F46 P50 T51 R52
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:7amn, PDBe:7amn, PDBj:7amn
PDBsum7amn
PubMed33693882
UniProtB4X9Q4

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