Structure of PDB 7agm Chain B

Receptor sequence
>7agmB (length=216) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
SNIAGMIVFLDPGHNGANDASIGRQVPTGRGGTKNCQESGTATDDGYPEH
SFTWDTTLRVRAALTALGVRTAMSRGNDNALGPCVDERAAMANSLRPHAI
VSIHADGGPPTGRGFHVLYSSPPLNAAQSGPSVQFAKVMRDQLAASGIPP
ATYIGQGGLNPRSDIAGLNLAQFPSVLVECGNMKNPVDSALMKSPEGRQK
YADAIVRGIAGFLGSQ
3D structure
PDB7agm Functional Characterization of the N -Acetylmuramyl-l-Alanine Amidase, Ami1, from Mycobacterium abscessus .
ChainB
Resolution1.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.28: N-acetylmuramoyl-L-alanine amidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN B H51 E86 H141 H14 E49 H104
Gene Ontology
Molecular Function
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0009253 peptidoglycan catabolic process
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7agm, PDBe:7agm, PDBj:7agm
PDBsum7agm
PubMed33158165
UniProtA0R5R2

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