Structure of PDB 6yx5 Chain B

Receptor sequence
>6yx5B (length=339) Species: 446 (Legionella pneumophila) [Search protein sequence]
HMFGSLYSDERDKPLLSPTAQKKFEEYQNKLANLSKIIRENEGNEVSPWQ
EWENGLRQIYKEMIYDAFDALGVEMPKDMEVHFAGSLAKAQATEYSDLDA
FVIVKNDEDIKKVKPVFDALNNLCQRIFTASNQIYPDPIGINPSRLIGTP
DDLFGMLKDGMVADVEATAMSILTSKPVLPRYECGEELRDKIKQEPSFSN
MVSAKKFYNKAIKDFTAPKEGAEVVSVKTHIMRPIDFMLMGLREEFNLYS
EDGAHLSAPGTIRLLREKNLLPEEQIARIESVYNQAMSKRFELHAEHKKE
HDEMPYSDAKAMLDEVAKIRELGVQRVTRIENLENAKKL
3D structure
PDB6yx5 Rab1-AMPylation by Legionella DrrA is allosterically activated by Rab1.
ChainB
Resolution2.14 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.108: protein adenylyltransferase.
2.7.7.n6: guanine phosphate-protein transferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 LJN B D91 E93 K118 P193 R194 C197 D78 E80 K105 P180 R181 C184
BS02 GLC B S99 K102 R246 D249 F250 S86 K89 R233 D236 F237
BS03 GLC B L186 K206 R256 N260 L261 H268 L173 K193 R243 N247 L248 H255
External links
PDB RCSB:6yx5, PDBe:6yx5, PDBj:6yx5
PDBsum6yx5
PubMed33469029
UniProtQ29ST3|DRRA_LEGPN Multifunctional virulence effector protein DrrA (Gene Name=drrA)

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