Structure of PDB 6yra Chain B

Receptor sequence
>6yraB (length=579) Species: 77298 (Pseudomonas jessenii) [Search protein sequence]
NTVDPITLAVVRGALETAQREMTLTLEKTSRSSVFNLAHDYSNALFDHLP
EMILQGQDIPIHLGSLIPAMKCVAGFFGDEIAEGDVIYHNDPAYMGSHIL
DCCMYKPVFYKGELVFWTVCKGHLTDIGGPVPAGYNPDAKEIYAEGLRIP
PVKLWAQGQRREDVINLLLTNMRARAYQEGDLNAQYGACSVGERHLIELL
DRYGVDQVRACITELKDMADRHMRALLRDVPDGFYSGTAILEDSGHGLGE
LSITAQVEIRGDEAHVLIESPPQVPYFINSYAGNSISGVYLGLMMFAQVP
PPYNEGLYRCVSVDLGPSGTLCNAQEPAPHVNCTTTPMETLADAVRLALE
QAAPERVTASWGHASGINIAGHDPRNNNDEYVTMVLASVISGAGANKAMD
GWPACGPLCCFGALMSGDIELLEYSYPVLIHRYSLMTDSGGAGEFRGGSG
TRLELEPLKHAMTVVGFGEGRQLPTAGAAGAKNVLLEPKLGRLIHRHVDG
EEDHYIQNTLLTAQPGERVINVNPGGGGYGDPLRRPLATVLADVRNGLVS
IDGARLEYGVVIDGNGQLDEAATHAHRAA
3D structure
PDB6yra Catalytic and structural properties of ATP-dependent caprolactamase from Pseudomonas jessenii.
ChainB
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D41 H99 D102 H124 D40 H98 D101 H123
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016787 hydrolase activity
GO:0017168 5-oxoprolinase (ATP-hydrolyzing) activity
GO:0046872 metal ion binding
Biological Process
GO:0006749 glutathione metabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6yra, PDBe:6yra, PDBj:6yra
PDBsum6yra
PubMed33826169
UniProtA0A2W0FH34|CAPLB_PSEJE Caprolactamase subunit beta (Gene Name=capB)

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