Structure of PDB 6yei Chain B

Receptor sequence
>6yeiB (length=406) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
ATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFR
VQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGI
GCDPSKLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILD
EYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGKTIS
GQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLK
HTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEIKAK
FIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGF
MWEEEKVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATI
LRGWGA
3D structure
PDB6yei Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism.
ChainB
Resolution2.02 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.4.1.3: glutamate dehydrogenase [NAD(P)(+)].
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 K B S27 L28 I30 P31 S22 L23 I25 P26
BS02 NAD B T185 F214 G215 N216 V217 D237 I238 A289 L290 N312 N337 T180 F209 G210 N211 V212 D232 I233 A284 L285 N307 N332 MOAD: Kd=72uM
Gene Ontology
Molecular Function
GO:0004352 glutamate dehydrogenase (NAD+) activity
GO:0004353 glutamate dehydrogenase [NAD(P)+] activity
GO:0004354 glutamate dehydrogenase (NADP+) activity
GO:0005507 copper ion binding
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0016491 oxidoreductase activity
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
GO:0050897 cobalt ion binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0009646 response to absence of light
Cellular Component
GO:0005739 mitochondrion
GO:0009536 plastid

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Molecular Function
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Cellular Component
External links
PDB RCSB:6yei, PDBe:6yei, PDBj:6yei
PDBsum6yei
PubMed32655590
UniProtQ43314|DHE1_ARATH Glutamate dehydrogenase 1 (Gene Name=GDH1)

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