Structure of PDB 6ydd Chain B

Receptor sequence
>6yddB (length=224) Species: 1934374 (Achaetomiella virescens) [Search protein sequence]
HTRMFSVWVNGVDQGDGQNVYIRTPPNTDPIKDLASPALACNVKGGEPVP
QFVSASAGDKLTFEWYRVKRGDDIIDPSHSGPITTWIAAFTSPTMDGTGP
VWSKIHEEGYDASTKSWAVDKLIANKGMWDFTLPSQLKPGKYMLRQEIVA
HHESDATFDKNPKRGAQFYPSCVQVDVKGVGGDAVPDQAFDFNKGYKYSD
PGIAFDMYTDFDSYPIPGPPVWDA
3D structure
PDB6ydd Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
ChainB
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.4: cellulase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B D76 S78 H79 D76 S78 H79
BS02 BGC B H152 E153 Y208 H152 E153 Y208
BS03 CU B H304 H79 H1 H79
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0046872 metal ion binding
Biological Process
GO:0030245 cellulose catabolic process
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ydd, PDBe:6ydd, PDBj:6ydd
PDBsum6ydd
PubMed32818374
UniProtA0A223GEC9|LP9A_COLVR AA9 family lytic polysaccharide monooxygenase A (Gene Name=AA9A)

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