Structure of PDB 6y7g Chain B

Receptor sequence
>6y7gB (length=165) Species: 9606 (Homo sapiens) [Search protein sequence]
NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTGIDFKVKTVFKNEKRIKLQ
IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS
WDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQ
TFERLVDIICDKMSE
3D structure
PDB6y7g Structure of the human RAB3C in complex with GDP
ChainB
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP B S40 G42 K43 T44 S45 N143 K144 D146 M147 S173 K175 S15 G17 K18 T19 S20 N111 K112 D114 M115 S141 K143
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0030742 GTP-dependent protein binding
GO:0031489 myosin V binding
Biological Process
GO:0006887 exocytosis
GO:0009306 protein secretion
GO:0015031 protein transport
GO:0017157 regulation of exocytosis
GO:0019882 antigen processing and presentation
Cellular Component
GO:0005768 endosome
GO:0005886 plasma membrane
GO:0008021 synaptic vesicle
GO:0030672 synaptic vesicle membrane
GO:0031982 vesicle
GO:0048471 perinuclear region of cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6y7g, PDBe:6y7g, PDBj:6y7g
PDBsum6y7g
PubMed
UniProtQ96E17|RAB3C_HUMAN Ras-related protein Rab-3C (Gene Name=RAB3C)

[Back to BioLiP]