Structure of PDB 6xl1 Chain B

Receptor sequence
>6xl1B (length=373) Species: 869209 (Treponema succinifaciens DSM 2489) [Search protein sequence]
MKETILVNLVSEQTIPNVQFIKWYFNKKQTPMKILLVSTKEMEQKEKSLF
IKNALHFSDSFVEWETIHTDGNDISKTENILTDYFRDNEYKNIIVNITGG
TKIMSLAAFDFFNNKPNTEIFYQPIGKELQELYPNKQKYDMFEVLSLKEY
LDAHGISYKYDNECVKDWNYNKTVYDLCVADNRELIKGMIALQNNSYFNN
VYKRKDFLDFTQIEEEKFIAINHPAATKENMIKILQIFGFDVSRIEHKHI
RYITGGWFEEYVYQKICNEYHNVDEKNVALNVTIQKGNDKNELNVIYLDK
DNKLHVIECKSFVDGNEGNRVLNDALYKLQAIIKSKFGLYVKQHLYTKSI
IEKETPLNRAKEFGIDIKDGTQL
3D structure
PDB6xl1 The Card1 nuclease provides defence during type III CRISPR immunity.
ChainB
Resolution1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B S11 E12 Q13 P16 T39 E41 M42 T98 G100 T101 K102 Y122 Q123 I125 Y340 S11 E12 Q13 P16 T39 E41 M42 T98 G100 T101 K102 Y122 Q123 I125 Y340
BS02 MN B N294 E308 C309 K310 N294 E308 C309 K310
BS03 MN B N79 D83 N79 D83
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6xl1, PDBe:6xl1, PDBj:6xl1
PDBsum6xl1
PubMed33461211
UniProtF2NWD3

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