Structure of PDB 6vxz Chain B

Receptor sequence
>6vxzB (length=389) Species: 869211 (Spirochaeta thermophila DSM 6578) [Search protein sequence]
PTYTLVWKVWILAVTLYYAIRIPLTLVFPSLFSPLLPLDILASLALIADI
PLDLAPSRLPDLLAALPLDLLVFALHLPSPLSLLSLVRLLKLISVQRSAT
RILSYRINPALLRLLSLVGFILLAAHGIACGWMSLQPPSENPAGTRYLSA
FYWTITTLTTIGYGDITPSTPTQTVYTIVIELLGAAMYGLVIGNIASLVS
KLDAAKLLHRERVERVTAFLSYKRISPELQRRIIEYFDYLWETRRGYEER
EVLKELPHPLRLAVAMEIHGDVIEKVALFKGAGEEFIRDIILHLEPVIYG
PGEYIIRAGEMGSDVYFINRGSVEVLSADEKTRYAILSEGQFFGEMALIL
RAPRTATVRARAFCDLYRLDKETFDRILSRYPEIAAQIQ
3D structure
PDB6vxz Prolyl isomerization controls activation kinetics of a cyclic nucleotide-gated ion channel.
ChainB
Resolution3.42 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CMP B Y357 G367 E368 M369 R377 Y334 G344 E345 M346 R354
BS02 PGW B S102 L109 G150 S157 S79 L86 G127 S134
BS03 PGW B N131 L134 L138 L225 N108 L111 L115 L202
Gene Ontology
Molecular Function
GO:0005221 intracellularly cyclic nucleotide-activated monoatomic cation channel activity
GO:0044877 protein-containing complex binding
Biological Process
GO:0034220 monoatomic ion transmembrane transport
GO:0098655 monoatomic cation transmembrane transport
Cellular Component
GO:0016020 membrane

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Cellular Component
External links
PDB RCSB:6vxz, PDBe:6vxz, PDBj:6vxz
PDBsum6vxz
PubMed33328472
UniProtG0GA88

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