Structure of PDB 6vtf Chain B

Receptor sequence
>6vtfB (length=337) Species: 5762 (Naegleria gruberi) [Search protein sequence]
VRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEI
DSFIKEDNDRYPMLSKQVIDYEGQRGTRLRTARLRGQLSQGLFLPMDRFP
ELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQN
LIPQIEENKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQ
WHAARRNKMIEGLQFLNRNLALQGEIIGESIQGNLEKLKGQDFYLFDIYD
IDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADG
PSLNKNVKREGLVFKRLDGKFSFKAISNAYLEKHKDR
3D structure
PDB6vtf Caveat mutator: alanine substitutions for conserved amino acids in RNA ligase elicit unexpected rearrangements of the active site for lysine adenylylation.
ChainB
Resolution2.71 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 POP B R4 K121 R149 K326 R2 K119 R147 K324
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6vtf, PDBe:6vtf, PDBj:6vtf
PDBsum6vtf
PubMed32315072
UniProtD2W2Z5

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