Structure of PDB 6voy Chain B

Receptor sequence
>6voyB (length=259) Species: 11927,273057 [Search protein sequence]
SPAELHSFTHCGQTALTLQGATTTEASNILRSCHACRGLLPNHIWQGDIT
HFKYKNTLYRLHVWVDTFSGAISATQKRKETSSEAISSLLQAIAYLGKPS
YINTDNGPAYISQDFLNMCTSLAIRHTTHVPYNPTSSGLVQRSNGILKTL
LYKYFTDKPDLPMDNALSIALWTINHLNVLTNCHKTRWQLHHSPRLQPIP
ETRSLSNKQTHWYYFKLPGLNSRQWKGPQEALQEAAGAALIPVSASSAQW
IPWRLLKRA
3D structure
PDB6voy Structural basis of host protein hijacking in human T-cell leukemia virus integration.
ChainB
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B N236 R238 Q239 N221 R223 Q224
BS02 ZN B H6 H10 C33 C36 H6 H10 C33 C36
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004521 RNA endonuclease activity
GO:0008270 zinc ion binding
Biological Process
GO:0015074 DNA integration
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6voy, PDBe:6voy, PDBj:6voy
PDBsum6voy
PubMed32561747
UniProtP14078;
P39476|DN7D_SACS2 DNA-binding protein 7d (Gene Name=sso7d)

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