Structure of PDB 6v1q Chain B

Receptor sequence
>6v1qB (length=538) Species: 7955 (Danio rerio) [Search protein sequence]
MTEKFDLATVYVSDAKYNRNIFFDTSPQAVKLYLLYNHWFMQTLVYVFII
INLALALFEDPAVVPLPIWATSTIETICLSAFTVRIIHYAKVIPKDKFWK
DPKNICIIIIVTLSFIDMVIYGALKATGHYGIRWSRVLRPLLLVNVTEGR
QLRRAFRSIRNALPQISYVFFLFMFSVLVFSLMALKLFGKRGLLTINGSP
YFTDYMDIVFDLYVLVTTANSPDVMMPAYNSSVYFTIFFILYIVINTYTF
MSFFLAVVYNNYKKYLKEEVRQLVKAKRIKMCRAFSLPSRFIRQMVHHRV
FVYAYDLIILVNAVFIGLDEENPVVSNAEWGFLALYMLEILLFWNWFDTI
IVVSALFGTIINSALKHSGGYTSRQVLDIVFILRVLRLIRVVDSIKRFRA
IINTLIKIGPTILTFGQLILVVYYIFAMVGMELFKGKIQFFEPNSTSPDR
EYCGNPLLKSTSFAKLNYCKNNFNDVISSFILLLELTVVNQWHVLTSGFT
AVTHVSARLFFVIFHIVVVIIIINIFVAFILEAFLVEY
3D structure
PDB6v1q Resting state structure of the hyperdepolarization activated two-pore channel 3.
ChainB
Resolution3.11 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NA B T251 N624 T218 N490
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0005248 voltage-gated sodium channel activity
GO:0015081 sodium ion transmembrane transporter activity
GO:0042803 protein homodimerization activity
Biological Process
GO:0001508 action potential
GO:0006811 monoatomic ion transport
GO:0035725 sodium ion transmembrane transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6v1q, PDBe:6v1q, PDBj:6v1q
PDBsum6v1q
PubMed31924746
UniProtC4IXV6

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