Structure of PDB 6ucz Chain B

Receptor sequence

>6uczB (length=265) Species: 948 (Anaplasma phagocytophilum)

VTTKIVGILNVTPNSFSDGGKFLEANAAIRHATDLIEHGADVIDVGAEST
APGVSPITQEEEWSRLKEVLPEIIRIAHNAHVEVSIDTRNAKTAELALKL
GVDYINDQGGLLDPDMPAIAAASSAKIIIMHHFGLPVSQDRSYVGQPEQL
LNEIIEWLCSRVDTLIAQGVVRERIILDPGLGFGKLPEYSWYIAKNIGKL
KKLGFPVCVGHSRKSMFSLIPVELSERDVPTAMLSTFLAQQQVDFLRVHD
VKLTGISIKIANLLV

3D structure

• PDB: 6ucz Crystal structure of dihydropteroate synthase from Anaplasma phagocytophilum with bound 6-hydroxymethylpterin-monophosphate
• Chain: B
• Resolution: 2.0 Å

Enzymatic activity

• Enzyme Commision number: 2.5.1.15: dihydropteroate synthase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	PMM	B	T77 D114 N133 M157 D205 F210 G237 K241 R274 H276	T50 D87 N106 M130 D178 F183 G210 K214 R247 H249

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Thu Dec 19 18:53:46 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1444         else:

=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1446     

   1447     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6ucz', asym_id = 'B', title = 'Crystal structure of dihydropteroate synthase fr...um with bound 6-hydroxymethylpterin-monophosphate'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6ucz', asym_id='B', title='Crystal structure of dihydropteroate synthase fr...um with bound 6-hydroxymethylpterin-monophosphate')

    839 

    840     if go:

=>  841         display_go(go,uniprot,pdbid,asym_id)

    842     return pubmed,uniprot

    843 

global display_go = <function display_go>, go = '0004156,0009396,0042558,0044237', uniprot = '', pdbid = '6ucz', asym_id = 'B'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004156,0009396,0042558,0044237', uniprot='', pdbid='6ucz', asym_id='B')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>