Structure of PDB 6u3m Chain B

Receptor sequence
>6u3mB (length=181) Species: 9606 (Homo sapiens) [Search protein sequence]
SPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTL
LGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTIS
PSHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILV
MLEMTPQRGDVYTCHVEHPSLQSPITVEWRA
3D structure
PDB6u3m T cell receptor cross-reactivity between gliadin and bacterial peptides in celiac disease.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B Y9 F11 G13 L26 S30 P56 A57 Y60 W61 R77 V78 H81 N82 L85 Y7 F9 G11 L24 S28 P54 A55 Y58 W59 R75 V76 H79 N80 L83
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6u3m, PDBe:6u3m, PDBj:6u3m
PDBsum6u3m
PubMed31873306
UniProtO19712

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