Structure of PDB 6t7c Chain B

Receptor sequence
>6t7cB (length=84) Species: 9606 (Homo sapiens) [Search protein sequence]
HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR
DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
3D structure
PDB6t7c Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
ChainB
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B H18 T30 P32 R36 K77 H1 T13 P15 R19 K60
BS02 dna B R45 I46 S47 G48 K79 T80 R28 I29 S30 G31 K62 T63
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0032200 telomere organization
GO:0045653 negative regulation of megakaryocyte differentiation
GO:0061644 protein localization to CENP-A containing chromatin
Cellular Component
GO:0000781 chromosome, telomeric region
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0016020 membrane
GO:0032991 protein-containing complex
GO:0043505 CENP-A containing nucleosome
GO:0070062 extracellular exosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:6t7c, PDBe:6t7c, PDBj:6t7c
PDBsum6t7c
PubMed32350470
UniProtP62805|H4_HUMAN Histone H4 (Gene Name=H4C1)

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