Structure of PDB 6sp2 Chain B

Receptor sequence
>6sp2B (length=365) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
PSCTNASSSRFMYAFILLVGTVLGAIALSPGLQDTLKKMPFCINSSLQVD
CEYALGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKF
LICFGAAIGAIFIPDGSFGPAMMWVGLIGGLAFILVQLVIIVDFAHSLAE
NWIESAENSRGYYYALAGVTLLCYILSLTGITLLYIYFTTSTGCGINKFF
ISINLIFCLAISVISILPAVQERLPHSGLLQSSLVTLYTVYLTWSAVANN
PEKECNPGMFGHTTRVTFDTTNIIGLVVWLLCILYNCISSAVETEGVTYS
WSMFHLVFVCASLYVMMTLTNWYKPHSEIELFNGNEASMWVKIVSSWLGV
FIYGWSLAAPIVLTN
3D structure
PDB6sp2 A bipartite structural organization defines the SERINC family of HIV-1 restriction factors.
ChainB
Resolution3.33 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LMN B F139 L142 L145 F95 L98 L101
BS02 LMN B M68 I72 I152 F156 M39 I43 I108 F112
BS03 LMN B N138 F144 F148 N94 F100 F104
BS04 P5S B Y231 F232 W288 Y187 F188 W244
BS05 LMN B G60 T64 L65 M68 G31 T35 L36 M39
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6sp2, PDBe:6sp2, PDBj:6sp2
PDBsum6sp2
PubMed31907454
UniProtQ9U6P4

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