Structure of PDB 6s1u Chain B

Receptor sequence
>6s1uB (length=106) Species: 11855 (Mason-Pfizer monkey virus) [Search protein sequence]
WVQPITAQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLT
NLRGSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLLSQMKI
MMASPN
3D structure
PDB6s1u Comparison of a retroviral protease in monomeric and dimeric states.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
3.6.1.23: dUTP diphosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B N26 G28 D30 I33 R53 P89 L92 N26 G28 D30 I33 R53 P86 L89
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:6s1u, PDBe:6s1u, PDBj:6s1u
PDBsum6s1u
PubMed31588922
UniProtP07572|POL_MPMV Gag-Pro-Pol polyprotein (Gene Name=gag-pro-pol)

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