Structure of PDB 6qp8 Chain B

Receptor sequence
>6qp8B (length=620) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
NLYYEPPCCTGEHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFRLNLR
NISQSICERDVLILEPTGSDILNCVSKGKREKVECRNHIRVIQPMNFNGQ
KLYVCGTNAHNPKDYVINANLTHLPRSQYVPGIGLGIGKCPYDPADNSTA
VYVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTV
KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKN
DRGGKYMISQNWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYA
TFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPE
PRPGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKL
VVDKIRIDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASP
HSEPIREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFRCVSDPYCG
WDKDVNACRPYQLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFV
KMPEVLRKKQTRWYHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDG
GRYDSYLDGTLLCSYGVTVD
3D structure
PDB6qp8 Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.
ChainB
Resolution2.33 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN B I284 N285 I234 N235
BS02 MAN B D258 H279 D208 H229
BS03 MAN B K381 W390 D428 K331 W340 D378
Gene Ontology
Molecular Function
GO:0030215 semaphorin receptor binding

View graph for
Molecular Function
External links
PDB RCSB:6qp8, PDBe:6qp8, PDBj:6qp8
PDBsum6qp8
PubMed31417095
UniProtA0A0B4KG38

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