Structure of PDB 6pu6 Chain B

Receptor sequence
>6pu6B (length=343) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
MSIIAINENGFLDKIKGRNPLFTCVISSIETTLSIPISGVHRDVIKYTPS
ADVELVFYGKSLTLKTPPSPTPATITRACVELKNIKNLHIDAGAFVKPKI
PFIEIDEKPTGRIEEGKAMNNSKELYMKGYLLGKNLDAELLIVGESVPGG
TTTALGVLLGLGYDAEGKVSSGSINNPHELKIKVVREGLKKAGINEKSSV
FDVLNAVGDKMMPVVAGLAISFAERNKPVILAGGTQMSAVLAVIKEINKK
VLDKNLIAIGTTEFVLNDKKGDLKGIVEQIGNVPVLASKFYFEKAKIEGL
KNYCKGSVKEGVGAGGIAVYSIVNDLEPTKIREFIENKFYEWY
3D structure
PDB6pu6 Structural Studies of a Phosphoribosyltransferase Involved in Cobamide Biosynthesis in Methanogenic Archaea
ChainB
Resolution2.293 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RBZ B S38 G39 D52 P68 P77 E150 V152 P153 G154 T156 G177 Q241 G316 S38 G39 D52 P68 P72 E145 V147 P148 G149 T151 G172 Q236 G311
BS02 NIO B S175 S176 G177 G239 T240 Q241 V313 E315 S170 S171 G172 G234 T235 Q236 V308 E310
Gene Ontology
Molecular Function
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:6pu6, PDBe:6pu6, PDBj:6pu6
PDBsum6pu6
PubMed36229494
UniProtQ58993|Y1598_METJA UPF0284 protein MJ1598 (Gene Name=MJ1598)

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