Structure of PDB 6ptv Chain B

Receptor sequence
>6ptvB (length=376) Species: 392021 (Rickettsia rickettsii str. 'Sheila Smith') [Search protein sequence]
HHMLKLIVETKTLVQSLGFASSVVEPEYANIKLSAQDGNLELSSTNMDLY
LSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKN
CKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETRY
NLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEEI
LKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKLIDGTFPDYSTFIP
ESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEAR
GNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYF
SDVSAPVLIKFPENPKDIFIVLPVKV
3D structure
PDB6ptv Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
ChainB
Resolution1.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B R152 G174 H175 P246 F251 L375 P376 V377 K378 R149 G171 H172 P243 F248 L372 P373 V374 K375
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ptv, PDBe:6ptv, PDBj:6ptv
PDBsum6ptv
PubMed
UniProtA0A0H3AWV3

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