Structure of PDB 6pt9 Chain B

Receptor sequence

>6pt9B (length=473) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence]

KKPNVLILLFDDMRFDTFSYRNGPVSTPNIDALANEGTRFDQAMTSTGLS
SPSRAAMFTGRWGHKTGLDDNVGLYHSRLSELSLSEGSVIKRATSIGYDV
SYVGKWHLGAQGPALRGANFMWGHDKDEERNGRPFTPYQTQKNVARMNAG
ERDKNGEKHDYYKTLPGTYADTVTAKEVNEGKLMLQNAAKSDKPFFGIVS
FEQPHPPYRVPEPYASMYDYKDIKLPKNFGIKRKHKPMAQDDIWWPWHDV
SHMSETDWRKAHSFYYGAIAMIDHAVGELINTAKEEGLYDDLHIILVGDQ
GSMLGEHNLYDKGPYAYDELMRMPLIIRDPSLEPKIINRQVSMLDIAPTL
RQWMTLPLDGDEDGRSLLPLMKQGDSADAGKDDISLYAYEWYNGGWFGIR
AIRTPEMKFVWNPGDSRDELYDLKNDPYEITNQIDNPKYKKQLTDLVHKM
AGELNRIDDPSLTKFNHHMKAFL

3D structure

PDB

6pt9 Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.

Chain

Resolution

1.66 Å

3D
structure

Catalytic site residues are labeled in the structure
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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	9RN	B	H239 W279 W281 D345 Y426 N427	H205 W245 W247 D311 Y392 N393
BS02	CA	B	D45 D46 S84 D333 Q334	D11 D12 S50 D299 Q300

External links

PDB	RCSB:6pt9, PDBe:6pt9, PDBj:6pt9
PDBsum	6pt9
PubMed	31886414

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