Structure of PDB 6pt8 Chain B

Receptor sequence
>6pt8B (length=349) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
MSIIAINENGFLDKIKGRNPLFTCVISSIETTLSIPISGVHRDVIKYTPS
ADVELVFYGKSLTLKTPPIDATGSPTPATITRACVELKNIKNLHIDAGAF
VKPKIPFIEIDEKPTGRIEEGKAMNNSKELYMKGYLLGKNLDAELLIVGE
SVPGGTTTALGVLLGLGYDAEGKVSSGSINNPHELKIKVVREGLKKAGIN
EKSSVFDVLNAVGDKMMPVVAGLAISFAERNKPVILAGGTQMSAVLAVIK
EINKKVLDKNLIAIGTTEFVLNDKKGDLKGIVEQIGNVPVLASKFYFEKA
KIEGLKNYCKGSVKEGVGAGGIAVYSIVNDLEPTKIREFIENKFYEWYK
3D structure
PDB6pt8 Structural Studies of a Phosphoribosyltransferase Involved in Cobamide Biosynthesis in Methanogenic Archaea
ChainB
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NIO B S175 S176 G177 G239 T240 Q241 V313 E315 S175 S176 G177 G239 T240 Q241 V313 E315
BS02 AAM B S38 G39 V40 D52 D70 T76 P77 E150 S151 V152 P153 G154 T156 G177 S38 G39 V40 D52 D70 T76 P77 E150 S151 V152 P153 G154 T156 G177
BS03 PO4 B R230 K232 R230 K232
Gene Ontology
Molecular Function
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:6pt8, PDBe:6pt8, PDBj:6pt8
PDBsum6pt8
PubMed36229494
UniProtQ58993|Y1598_METJA UPF0284 protein MJ1598 (Gene Name=MJ1598)

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