Structure of PDB 6prg Chain B

Receptor sequence
>6prgB (length=386) Species: 170187 (Streptococcus pneumoniae TIGR4) [Search protein sequence]
DGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTR
VLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRVKNGYAEKYAV
NEKVYNVPFTANAYGIYYNKDKFEELGLKVPETWDEFEQLVKDIVAKGQT
PFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMK
DDIKVMDILRINGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAIN
EQKPNFKIGTFMIPGKEKGQSLTVGAGDLAWSISATTKHPKEANAFVEYM
TRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQY
WTSEADFHTLTMNYVLTGDKQGMVNDLNAFFNPMKA
3D structure
PDB6prg Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system.
ChainB
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC B K43 W190 K13 W160
BS02 GLA B K42 E44 Y93 W274 D308 K12 E14 Y63 W244 D278
BS03 GLA B Y93 N193 W274 W376 Q378 E384 Y63 N163 W244 W346 Q348 E354
BS04 FRU B G74 E75 G44 E45
Gene Ontology
Biological Process
GO:0055085 transmembrane transport

View graph for
Biological Process
External links
PDB RCSB:6prg, PDBe:6prg, PDBj:6prg
PDBsum6prg
PubMed31591266
UniProtA0A0H2URJ7

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