Structure of PDB 6ppo Chain B

Receptor sequence
>6ppoB (length=235) Species: 463676 (Rhinovirus C) [Search protein sequence]
GLPTRLPSGSQQFMTTEDEQSPNILPGFHPSKKIHIPGMITNVMHMARVD
SFIPINNIQGEVGKVSMYYITVTKKTVTERILVLPLEMSNTLFATTLLGE
VLNYYANWSGSITITFMCVCDAFSTGKFLVAYTPPGGKLPEDRKQAMLGV
HIIWDLGLQSSCTIVVPWISSGFYRRTKADSFTHGGYVSLWYQTAFVPPV
SGGTGSILATCSACPDMSVRMLRDSPMMEQKNELQ
3D structure
PDB6ppo Cryo-EM structure of rhinovirus C15a bound to its cadherin-related protein 3 receptor.
ChainB
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.4.22.28: picornain 3C.
3.4.22.29: picornain 2A.
3.6.1.15: nucleoside-triphosphate phosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B D18 Q20 S21 P22 N23 G38 R48 D18 Q20 S21 P22 N23 G38 R48
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:6ppo, PDBe:6ppo, PDBj:6ppo
PDBsum6ppo
PubMed32152109
UniProtE5D8F2|POLG_HRV15 Genome polyprotein

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