Structure of PDB 6pef Chain B

Receptor sequence

>6pefB (length=211) Species: 9544 (Macaca mulatta) [Search protein sequence]

SVLTQPPSVSAAPGQKVTISCSGSSSNIGINYVAWYQQVPGTAPKLLIYD
SNKRPSGVSDRFSGSKSGISASLAITGLQTGDEADYYCGVWDTSLTAYIF
GAGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVA
WKADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTH
EGSTVEKTVAP

3D structure

PDB

6pef Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies

Chain

Resolution

2.004 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	N32 Y33 Y37 W92 T94 Y99	N31 Y32 Y36 W91 T93 Y98

External links

PDB	RCSB:6pef, PDBe:6pef, PDBj:6pef
PDBsum	6pef
PubMed

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