Structure of PDB 6pdw Chain B

Receptor sequence
>6pdwB (length=294) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
EKNERTRIKAQENLRRIRRKQIDLVLNEYENQVALEVVAPEDIPVGFNDI
GGLDDIIEELKETIIYPLTMPHLYKHGGALLAAPSGVLLYGPPGCGKTML
AKAVAHESGASFINLHISTLTEKWYGDSNKIVRAVFSLAKKLQPSIIFID
EIDAVLGGEHEASGMVKAEFMTLWDGLTSTNASGVPNRIVVLGATNRIND
IDEAILRRMPKQFPVPLPGLEQRRRILELVLRGTKRDPDFDLDYIARVTA
GMSGSDIKETCRDAAMAPMREYIRQHRASGKPLSEINPDDVRGI
3D structure
PDB6pdw Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
ChainB
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B K186 W187 H227 K123 W124 H160
BS02 ADP B G114 G157 C158 G159 K160 T161 M162 I293 K325 G51 G94 C95 G96 K97 T98 M99 I226 K258
BS03 BEF B K160 E214 K97 E151
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0140570 extraction of mislocalized protein from mitochondrial outer membrane
Cellular Component
GO:0005741 mitochondrial outer membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6pdw, PDBe:6pdw, PDBj:6pdw
PDBsum6pdw
PubMed31999255
UniProtG0S654

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