Structure of PDB 6p7q Chain B

Receptor sequence
>6p7qB (length=240) Species: 749537 (Escherichia coli MS 115-1) [Search protein sequence]
SDWSLSQLFASLHEDIQLRLGTARKAFQHPGAKGDASEGVWIEMLDTYLP
KRYQAANAFVVDSLGNFSDQINVVVFDRQYSPFIFKFNEQIIVPAESVYA
VFEAKQSASADLVAYAQRKVASVRRLHRTSLPIPHAGGTYPAKPLIPILG
GLLTFESDWSPALGMSFDKALNGDLSDGRLDMGCVASHGHFYFNNIDSKF
NFEHGNKPATAFLFRLIAQLQFSGTVPMIDIDAYGKWLAN
3D structure
PDB6p7q Structure and Mechanism of a Cyclic Trinucleotide-Activated Bacterial Endonuclease Mediating Bacteriophage Immunity.
ChainB
Resolution1.66 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B Y81 I134 T226 P228 M229 Y80 I133 T225 P227 M228
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6p7q, PDBe:6p7q, PDBj:6p7q
PDBsum6p7q
PubMed31932164
UniProtD7Y2H5|NUCC_ECOM1 Endodeoxyribonuclease NucC (Gene Name=nucC)

[Back to BioLiP]