Structure of PDB 6p40 Chain B

Receptor sequence
>6p40B (length=364) Species: 9544 (Macaca mulatta) [Search protein sequence]
NMVEPMDPRTFVSNFNNRPILSGLDTVWLCCEVKTKDPSGPPLDAKIFQG
KVYPKAKYHPEMRFLRWFHKWRQLHHDQEYKVTWYVSWSPCTRCANSVAT
FLAKDPKVTLTIFVARLYYYWDPDYQQALRILAEAGATMKIMNYNEFQDC
WNKFVDGRGKPFKPWNNLPSHYTSLQATLGELLRHLMDPGTFTSNFNNKP
WVSGQHETYLCYKVERLHNDTWVPLNQHRGFLRNQAGRHAALCFLDLIPF
WKLDGQQYRVTCFTSWSPCFSCAQEMAKFISNNEHVSLCIFAARIYDDQG
RYQEGLRTLHRDGAKIAMMNYSEFEYCWDTFVDRQGRPFQPWDGLDEHSQ
ALSGRLRAILQNQG
3D structure
PDB6p40 Understanding the structural basis of HIV-1 restriction by the full length double-domain APOBEC3G.
ChainB
Resolution2.452 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.5.4.-
3.5.4.38: single-stranded DNA cytosine deaminase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H65 C97 C100 H59 C91 C94
BS02 ZN B H257 C287 C290 H239 C269 C272
Gene Ontology
Molecular Function
GO:0003824 catalytic activity

View graph for
Molecular Function
External links
PDB RCSB:6p40, PDBe:6p40, PDBj:6p40
PDBsum6p40
PubMed32005813
UniProtM1GSK9

[Back to BioLiP]