Structure of PDB 6oyv Chain B

Receptor sequence
>6oyvB (length=446) Species: 32630 (synthetic construct) [Search protein sequence]
PPGPFPWPPHLSFARLARRYGDVFQIRLGSCPVVVLNGERAIRQALVQQG
AAFAGRPPFPSFQVVSGGRSLAFGRYSERWKVQRRVAHSTVRAFSTGQPR
SRRVLEQHVLGEARELVRLLVRGSAGGAFLDPAPLTVVAVANVMSAVCFG
CRYSHDDAEFRGLLSHNEKFGRTVGAGSLVDVLPWLQRFPNPVRTAFRDF
QQLNRDFYSFVLDKFLRHRSSLRPGAAPRDMMDAFIHTVPRLDLEYVPAT
VTDIFGASQDTLSTALQWLLILFTRYPEVQARVQEELDRVVGRDRLPCMD
DQPHLPYVMAFLYEAMRFSSFVPVTIPHATTADTSIMGYHIPKDTVVFVN
QWSVNHDPVKWPNPEDFNPARFLNKDLASSVMIFSVGKRRCIGEELSKMQ
LFLFISILAHQCNFRANPDEDSKMDFSYGLTIKPKSFTINVTLRST
3D structure
PDB6oyv Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.
ChainB
Resolution3.101 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EST B F134 G329 A330 L509 F73 G256 A257 L430
BS02 HEM B R117 A133 W141 R145 I327 A330 T334 I399 H401 I462 F463 S464 R468 C470 I471 G472 S476 R56 A72 W80 R84 I254 A257 T261 I326 H328 I383 F384 S385 R389 C391 I392 G393 S397
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 04:13:00 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6oyv', asym_id = 'B', title = 'Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6oyv', asym_id='B', title='Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0004497,0005506,0016705,0020037', uniprot = '', pdbid = '6oyv', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004497,0005506,0016705,0020037', uniprot='', pdbid='6oyv', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>