Structure of PDB 6otf Chain B

Receptor sequence
>6otfB (length=521) Species: 52276 (Snow Mountain virus) [Search protein sequence]
TDGAAGLVPESNNEVMALEPVAGAALAAPVTGQTNIIDPWIRANFVQAPN
GEFTVSPRNAPGEVLLNLELGPELNPYLAHLARMYNGYAGGMEVQVMLAG
NAFTAGKLVFAAVPPHFPVENLSPQQITMFPHVIIDVRTLEPVLLPLPDV
RNNFFHYNQKDDPKMRIVAMLYTPLRSNGSGDDVFTVSCRVLTRPSPDFD
FTYLVPPTVESKTKPFTLPILTLGELSNSRFPVSIDQMYTSPNEVISVQC
QNGRCTLDGELQGTTQLQVSGICAFKGEVTAHLQDNDHLYNITITNLNGS
PFDPSEDIPAPLGVPDFQGRVFGVITQRDKQNAAGQSQPANRGHDAVVPT
YTAQYTPKLGQVQIGTWQTDDLKVNQPVKFTPVGLNDTEHFNQWVVPRYA
GALNLNTNLAPSVAPVFPGERLLFFRSYLPLKGGYGNPAIDCLLPQEWVQ
HFYQEAAPSMSEVALVRYINPDTGRALFEAKLHRAGFMTVSSNTSAPVVV
PANGYFRFDSWVNQFYSLAPM
3D structure
PDB6otf High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
ChainB
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H293 Q295 H299 H282 Q284 H288
Gene Ontology
Cellular Component
GO:0044423 virion component

View graph for
Cellular Component
External links
PDB RCSB:6otf, PDBe:6otf, PDBj:6otf
PDBsum6otf
PubMed31182604
UniProtQ80RD6

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