Structure of PDB 6orf Chain B

Receptor sequence
>6orfB (length=449) Species: 170187 (Streptococcus pneumoniae TIGR4) [Search protein sequence]
KIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPS
QLDAREWVRVLKETGFKKLILVVKHHDGFVLYPTAHTDYSVKVSPWRRGK
GDLLLEVSQAATEFDMDMGVYLSPWDAHSPLYHVDREADYNAYYLAQLKE
ILSNPNYGNAGKFAEVWMNGARGEGAQKVNYEFEKWFETIRDLQGDCLIF
STEGTSIRWIGNQRGYAGDPLWQKVNPDKLGTEAELNYLQHGDPSGTIFS
IGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQAG
LFDAKDIERLYEFATYRNELYKEDLALGAEVSGPALSADFACRHLTDGLE
TSSWASDADLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEVDG
VWQEFGSGHTVGYKRLLRGAVVEAQKIRVVITESQALPLLTKISLYKTP
3D structure
PDB6orf Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC B H28 W39 H77 H78 Y123 N171 W264 H26 W37 H75 H76 Y121 N169 W262
BS02 GAL B N171 G172 W211 D257 N169 G170 W209 D255
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6orf, PDBe:6orf, PDBj:6orf
PDBsum6orf
PubMed31266803
UniProtA0A0H2US78

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