Structure of PDB 6oc6 Chain B

Receptor sequence
>6oc6B (length=579) Species: 272630 (Methylorubrum extorquens AM1) [Search protein sequence]
NESVLKGVANPAEQVLQTVDYANTRYSKLDQINASNVKNLQVAWTFSTGV
LRGHEGSPLVVGNIMYVHTPFPNIVYALDLDQGAKIVWKYEPKQDPSVIP
VMCCDTVNRGLAYADGAILLHQADTTLVSLDAKSGKVNWSVKNGDPSKGE
TNTATVLPVKDKVIVGISGGEFGVQCHVTAYDLKSGKKVWRGYSIGPDDQ
LIVDPEKTTSLGKPIGKDSSLKTWEGDQWKTGGGCTWGWFSYDPKLDLMY
YGSGNPSTWNPKQRPGDNKWSMTIWARNPDTGMAKWVYQMTPHDEWDFDG
INEMILTDQKFDGKDRPLLTHFDRNGFGYTLDRATGEVLVAEKFDPVVNW
ATKVDLDKGSKTYGRPLVVSKYSTEQNGEDVNSKGICPAALGTKDQQPAA
FSPKTGLFYVPTNHVCMDYEPFRVTYTPGQPYVGATLSMYPAPGSHGGMG
NFIAWDNLQGKIKWSNPEQFSAWGGALATAGDVVFYGTLEGFLKAVDSKT
GKELYKFKTPSGIIGNVMTYEHKGKQHVAVLSGVGGWAGIGLAAGLTDPN
AGLGAVGGYAALSSYTNLGGQLTVFSLPN
3D structure
PDB6oc6 Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function.
ChainB
Resolution2.89 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E192 N276 D318
Catalytic site (residue number reindexed from 1) E171 N255 D297
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PQQ B E76 C124 C125 R130 T174 S189 G190 G191 E192 W258 D320 R345 D416 W494 G557 W558 E55 C103 C104 R109 T153 S168 G169 G170 E171 W237 D299 R324 D395 W473 G536 W537
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Cellular Component
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:6oc6, PDBe:6oc6, PDBj:6oc6
PDBsum6oc6
PubMed32366463
UniProtC5B120|XOXF1_METEA Lanthanide-dependent methanol dehydrogenase (Gene Name=xoxF1)

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