Structure of PDB 6oai Chain B

Receptor sequence
>6oaiB (length=158) Species: 10941 (Human rotavirus A) [Search protein sequence]
LDGPYQPTNFKPPNDYWILLNPTNQQVVLEGTNKTDIWVALLLVEPNVTN
QSRQYTLFGETKQITVENNTNKWKFFEMFRSNVSAEFQHKRTLTSDTKLA
GFMKFYNSVWTFHGETPHATTDYSSTSNLSEVETVIHVEFYIIPRSQESK
CSEYINTG
3D structure
PDB6oai Molecular basis of P[II] major human rotavirus VP8* domain recognition of histo-blood group antigens.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B N108 Y124 N107 Y123
BS02 GAL B T121 T122 T120 T121
Gene Ontology
Biological Process
GO:0019058 viral life cycle
Cellular Component
GO:0019028 viral capsid

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Biological Process
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Cellular Component
External links
PDB RCSB:6oai, PDBe:6oai, PDBj:6oai
PDBsum6oai
PubMed32208455
UniProtD2DXN5

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