Structure of PDB 6o42 Chain B

Receptor sequence

>6o42B (length=221) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGG
IIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREG
EGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI
CNVNHKPSNTKVDKKVEPKSC

3D structure

PDB

6o42 An MPER antibody neutralizes HIV-1 using germline features shared among donors.

Chain

Resolution

2.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	G50 I52 N58 E95 G100A K100B P100C R100E	G50 I52 N59 E99 G105 K106 P107 R109

External links

PDB	RCSB:6o42, PDBe:6o42, PDBj:6o42
PDBsum	6o42
PubMed	31772165

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