Structure of PDB 6npa Chain B

Receptor sequence
>6npaB (length=187) Species: 506591 (Leisingera caerulea) [Search protein sequence]
KLNRGNIVEFIGGIFDRRGDEEYLGEPVTMAEHMLQGATIAEQNGQPEEI
IVGALLHDIGHFTSEFGMFSMDDTEDRYHEEAGAEVLEQFFPSVITDCVR
YHVAAKRYLCATKPEYFNRLSEASIHSLKLQGGPMDAEEVAEFEKNPNLK
QIIAVRYLDEAGKRADMETPDYWHFAPMVQRMVDKHM
3D structure
PDB6npa A New Microbial Pathway for Organophosphonate Degradation Catalyzed by Two Previously Misannotated Non-Heme-Iron Oxygenases.
ChainB
Resolution1.73 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.13.11.90: [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase (glycine- betaine-forming).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE B Y30 H40 H64 D65 D166 Y23 H33 H57 D58 D159
BS02 FE B E92 E95 E85 E88
BS03 FE B E82 E92 E75 E85
BS04 FE2 B D65 H86 H109 D58 H79 H102
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6npa, PDBe:6npa, PDBj:6npa
PDBsum6npa
PubMed30789718
UniProtA0A4V8H040|TMPB_LEICA [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase (glycine-betaine-forming) (Gene Name=tmpB)

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