Structure of PDB 6nlr Chain B

Receptor sequence
>6nlrB (length=273) Species: 267410 (Listeria monocytogenes serotype 4b str. H7858) [Search protein sequence]
MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKN
TAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGY
EDFTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYG
GFEQAQLAYLEGVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFS
EEVMEKFRVILALVKKRDYELDFNTAGLFKPLCGETYPPKKIVTLASELQ
IPFVYGSDSHGVQDIGRGYSTYC
3D structure
PDB6nlr High-Throughput PIXE as an Essential Quantitative Assay for Accurate Metalloprotein Structural Analysis: Development and Application.
ChainB
Resolution2.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CO B H6 H8 E93 D258 H6 H8 E93 D258
BS02 FE B H14 H40 H260 H14 H40 H260
BS03 FE B E93 H123 H181 E93 H123 H181
BS04 CA B Y141 F152 A155 Q156 C185 Y141 F152 A155 Q156 C185
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 10:13:37 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6nlr', asym_id = 'B', title = 'High-Throughput PIXE as an Essential Quantitativ...tructural Analysis: Development and Application. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6nlr', asym_id='B', title='High-Throughput PIXE as an Essential Quantitativ...tructural Analysis: Development and Application. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0000105,0003824,0004401', uniprot = '', pdbid = '6nlr', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000105,0003824,0004401', uniprot='', pdbid='6nlr', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>