Structure of PDB 6mg1 Chain B

Receptor sequence
>6mg1B (length=70) Species: 9606 (Homo sapiens) [Search protein sequence]
KHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVE
QLSRELSTLRNLFKQLPEPL
3D structure
PDB6mg1 Structural basis for effects of CpA modifications on C/EBP beta binding of DNA.
ChainB
Resolution1.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B A284 K287 S288 K291 A16 K19 S20 K23 PDBbind-CN: Kd=0.029uM
BS02 dna B Y274 R278 N282 R286 R289 K293 Y6 R10 N14 R18 R21 K25 PDBbind-CN: Kd=0.029uM
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006351 DNA-templated transcription
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6mg1, PDBe:6mg1, PDBj:6mg1
PDBsum6mg1
PubMed30566668
UniProtP17676|CEBPB_HUMAN CCAAT/enhancer-binding protein beta (Gene Name=CEBPB)

[Back to BioLiP]