Structure of PDB 6m6s Chain B

Receptor sequence

>6m6sB (length=162) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]

NKIYKLMCSNCSKEFCKSIYIKKVFSNYMVFDPSVWRFLHVESKRKVSKY
LSEDNQPLSDIKCFHCKLDVGRAYKIRGTYLPQLSVKALTFVQESDYSSM
TKAKWSDVEQDLFYISEAIEDDFRIMLNALSDTEENIEKKIVLDLDSRQH
NKQLEMKRFHIQ

3D structure

PDB

6m6s Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3).

Chain

Resolution

1.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

3.6.4.13: RNA helicase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	B	F969 Y994 N999	F25 Y50 N55
BS02	rna	B	S970 N971 S992 K993 Y994 R1016 Y1018 Q1027 K1048 W1049 S1050	S26 N27 S48 K49 Y50 R72 Y74 Q83 K104 W105 S106
BS03	ZN	B	C952 C955 C1007 C1010	C8 C11 C63 C66

External links

PDB	RCSB:6m6s, PDBe:6m6s, PDBj:6m6s
PDBsum	6m6s
PubMed	34403472
UniProt	Q93413

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