Structure of PDB 6kx1 Chain B

Receptor sequence

>6kx1B (length=219) Species: 10090 (Mus musculus) [Search protein sequence]

DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPK
LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVP
PWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDI
NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTC
EATHKTSTSPIVKSFNRNE

3D structure

PDB

6kx1 A straightforward approach to antibodies recognising cancer specific glycopeptidic neoepitopes

Chain

Resolution

1.773 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	H31 N33 Y37 H39 Y54 S96	H31 N33 Y37 H39 Y54 S96

External links

PDB	RCSB:6kx1, PDBe:6kx1, PDBj:6kx1
PDBsum	6kx1
PubMed

[Back to BioLiP]